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Genotyping Dog Genes

Submitted by sharrath on Fri, 03/01/2019 - 11:28

The goal of this unit was to develop the ability to infer the genotype of various breeds of dogs at different genes. This was done by sequencing either the entire genome or, more practically, specific sequences containing desired single nucleotide polymorphisms (SNPs). There are many methods by which sequencing can be accomplished, but the most common method is Sanger sequencing. Sanger sequencing is run by amplifying desired DNA sequences in a solution containing regular deoxynucleotides (dNTPs) and a minimal amount of dideoxynucleotides (ddNTPs). These ddNTPs are structurally similar to typical nucleotides, but lack an OH group on the 3’ carbon that prevents the growth of the chain. As a result, sequences terminate at different lengths depending on the how early the ddNTP is added. The differently sized products of the amplification are then run through an agarose gel where they separate into bands. The distribution of the bands can then be used to read the sequence of the DNA.

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Instead of using but in, "There are many methods by which sequencing can be accomplished, but the most common method is Sanger sequencing." just get rid of it.

I do not think you should repeat Sanger sequencing two times in a row. For the second time, replace Sanger sequencing by "it"