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Intro PP

Submitted by ryip on Sat, 03/11/2017 - 16:30

The overall purpose of this Methods project is to prepare a thorough and descriptive manuscript with illustrates the process of research and documentation of a common subject, such as a patch of moss. This project demonstrates the importance of descriptive writing in order for scientific readers and researchers to replicate and perform identical experiments. In order to demonstrate this, a moss plant was required to be located, described and documented. Using visual documentation, such as close-up photos and geographical map images, a multi-panel scientific figure was formed as well. The project then tasked another colleague to replicate the location, description and documentation of the plant, allowing them to create their own multi-panel scientific figure that would allow them to form a similar multi-panel figure. The results indicated that with all replicate experiments there are errors and subtle differences that can affect or change the overall outcome of the initial experiment.

Animal Behavior Research Idea

Submitted by ryip on Fri, 03/10/2017 - 10:47

For my Animal Behavior lab we needed to come up with ideas of an experiment we can conduct on animal behavior. I chose to focus my proposal on observing and experimenting on squirrels. I came up the idea with observing the efficiency of squirrels collecting food when there is some sort of inference in the way, like humans or natural obstacles. The experiment would time and test how fast the squirrels would be able to collect the food, and to see if they will be able to learn from past trails or by observing other squirrels performing the same task. 

Photorespiration journal

Submitted by ryip on Fri, 03/10/2017 - 10:46

In my plant physiology class we were discussing the process of photorespiration, which is a process in plant metabolism that take place with CO2 levels are low in plants. I was initially fascinated to learn that a component reaction in photorespiration called oxygenation was considered a very wasteful process it works at a slower rate than other metabolic processes and it requires a much higher metabolic cost. It made me wonder why plants haven’t evolve this process to be more efficient but I realize that this process still essentially does it “job”, just at a much slower rate than ideal. Another interesting component of photorespiration is its usage of an enzyme of RuBisCO. I was shocked to find out that RuBisCO is one of most abundant enzyme in the world because it was an enzyme I had never heard about until we learned about it in lecture.

Introduction Draft

Submitted by ryip on Fri, 03/10/2017 - 10:46

The overall purpose of this Methods project is to prepare a thorough and descriptive manuscript with illustrates the process of research and documentation of a common subject, such as a patch of moss. This project demonstrates the importance of descriptive writing in order for scientific readers and researchers to replicate and perform identical experiments. In order to demonstrate this, a moss plant was required to be located, described and documented. Using visual documentation, such as close-up photos and geographical map images, a multi-panel scientific figure was formed as well. The project then tasked another colleague to replicate the location, description and documentation of the plant, allowing them to create their own multi-panel scientific figure that would allow them to form a similar multi-panel figure. The results indicated that with all replicate experiments there are errors and subtle differences that can affect or change the overall outcome of the initial experiment.

class exercise

Submitted by ryip on Fri, 02/24/2017 - 16:08

Image 10

 

  • Out of focus
  • Slightly different distances/zoom
  • Slightly different angles
  • Images aren’t cropped the same
  • Different time of day/weather conditions

 

The first set of images seem to be very out of focus, or the images were taken with a low-quality camera, while the second set of images is in focus and has a better camera quality. The two sets of images seem to have been taken a slightly different angles or used a slightly different zoom. The two sets of images also have a noticeable difference in the time of day and weather condition when the images were taken. Figure A in the first set was taken on a cloudier day, while Figure A in the second set was taken on a day with significantly less clouds. Figure B in the first set seems to have been taken when the sun was rising/setting based on the lighting of the trees in the background, while Figure B in the second set was taken on a less sunny day. Significantly more snow in the first set of images compared to the second set: In Figure A of the first set, there is noticeably more snow on the rooftop than on the rooftop seen in the replicate figure. Figure C of the first set also shows more snow on the pathway next to the tree, while the replicate figure shows that the snow on the pathway has melted a fair bit. Snow on tree trunk.

Pill Bugs Perfect Paragraph

Submitted by ryip on Fri, 02/24/2017 - 16:07

During one of my labs, we were observing and experiment the behavior of pill bugs.. The two pill bugs we were given reminded me of the white worm-like creature we were given to observe on the first day of BIO 312. The pill bugs seemed to behave and interact with the Petri dish environment the same way as the white worm did. The only noticeable differences between the two were the movements and appearances of the each creatures. In lab, we observed the pill bugs for several minutes at a time, jotting down details about their behavior in 30-second intervals. Eventually, we moved on to the experiment portion of the lab, in which we would choose different environments for the pill bugs to interact with. To do this, we taped two Petri dishes together while making an intersection between the two, which would allow the pill bugs to potentially move between Petri dishes. Using this unique Petri dish, we experimented on whether pill bugs prefer a wet or dry environment. We did this by wetting a circular piece of paper towel, which would be placed on one of the Petri dish, while we placed a dry circular piece on the other Petri dish. We then placed one pill bug on the wet side, while the other was placed on the dry side. We observed the pill bugs interaction with these environments for several minutes, noting whether they traveled to a different environment as well as when they would make the transition. The experiment was an interesting way to see what environment pill bugs preferred in a completely controlled setting, and it was also interesting to see if our initial predictions were correct.

Manuscript Submission Guidelines for International Journal of Genomics

Submitted by ryip on Fri, 02/24/2017 - 16:06

The manuscript guidelines: https://www.hindawi.com/journals/ijg/guidelines/

This is the Hindawi Publishing Corporation’s manuscript guidelines for the International Journal of Genomics science journal. Papers must be submitted on the understanding that they have not been published elsewhere and are not currently under consideration by another journal. All manuscripts must be peer reviewed. The abstract for the paper must not exceed 200 words. 

Pill Bugs Journal

Submitted by ryip on Fri, 02/17/2017 - 12:27

We observed and experimented on two pill pugs in lab this week. We initially observed the pill bugs for 10 minutes, while also noting the kinds of behavior the pill bugs were exhibiting. Once we finished our observations, we moved onto to asking questions we wanted to know about the pill bugs and how they interacted with their environment. We specifically question what type of environments the pill bugs would prefer. Our first experiment involved placing the our pill bugs into a Venn diagram shaped Petri dish which would allow the pill bugs to move between Petri dish. We wanted to test whether pill bugs preferred a dry or wet environment in this experiment. We placed a wet piece of paper towel into one side of the Petri dish while placing a dry piece of paper towel onto the other side. A pill bug was placed on either side and we observed their behavior. We made sure to note whether the pill bugs moved to a different environment, as well as the length of time they stayed in that environment. Our initial prediction was that both pill bugs would naturally favor the wet environment because they would have a water source, and because they are commonly found in wet areas. Our prediction and hypothesis proved to be right when we noticed that both pill bugs stayed in the wet environment for a longer period of time than the dry environment. 

Nest-building Birds

Submitted by ryip on Fri, 02/17/2017 - 10:15

develops. We are eventually shown a short video segment, which is narrated by David Attenborough, a famous naturalist, who is observing Weaverbirds. Weaverbirds are considered some of the best nest-building birds on the planet. These birds have the inherent ability and knowledge to use thousands of individual grass blades to build intricate small nests on tree branches. It is fascinating when you realize that these birds aren’t necessarily being taught to build these nests instead they are able to successful make nests using their own intuition and through trial and error. The nest-building ability of these Weaverbirds is to be genetically programmed into their DNA, which supports the argument that animal behavior develops from an animal’s genes.

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